Well in the one photo you can clearly see wooden shims under the side with the gap between floor and toilet. Plumbers do that when the bowl rocks on the floor. (Terry likes the plastic shims from Home Depot, but lots of people use the wood ones.) The rocking can be the result of many things. Most toilets, because they (as Jim points out) are clay that shrinks dramatically when fired in a kiln, have very-slight imperfections; some manufacturers are tighter on what they release to sell than are others. Kohler is a reputable brand, so it is not likely primarily an issue with the porcelain (although it might be). Are these "builder-grade" Kohlers, or did you specify a particular Kohler model? It can make a difference (although not to say that it has made a difference here).
It looks like the floor slopes somewhat to the right to begin with, based on the photo of your level, then the builder added shims on the left side of the toilet to eliminate rocking when they dry-fit it. By shimming it to the right, on top of the lean of the floor to begin with, your water spot has shifted to a place that is pretty darn unsightly.
Candidly, just from an appearance perspective, that's the worst I have ever seen. And it's probably a non-plumber job, insofar as any real plumber I know who has a hint of pride would have seen that, pulled out a level, and in 5 seconds realized that the weird water spot was the result of shimming on the left combined with a floor slope to the right. If the purpose of the shim is to prevent rocking, as it should be, then if the toilet was shimmed from the other side, the shim would compensate for, rather than exacerbate, the floor lean. They could have given you a pretty-close-to-perfectly-centered water spot, but instead left it like that and went and had a smoke.
For what it's worth, I am a little troubled by the shim that appears to be inserted at about 7 o'clock as you look top-down at the toilet. The better practice is to eliminate front-to-back rocking (which a shim positioned there would seem to be an attempt to do), by "pinning" the toilet forward with a shim or two at the back. Tilting the toilet forward raises the height of the weir a little, leading to a little-larger water spot, whereas tilting the toilet backwards lowers the height of the weir a little, leading to a little-smaller water spot. Of course, for performance to specification, as level as possible is best.
The pictures of this one toilet suggest to me that the difference in your water spot size among three "identical" toilets may well be primarily the result of how the toilets were shimmed upon installation. However, given that someone looked at that water spot, shrugged, and moved on, I have no confidence that they checked that the toilet was filling properly, either. So I would still do the easy checking that I mentioned in my first post.
BTW, WorthFlorida well-stated some good information on toilet bowl construction and what to look at with your level and what it means. It was helpful in looking at your situation.
If this is a newly-built house, which it sounds like from your reference to your builder (as opposed to a house that's "new" in the sense of being new to you), this should have been a punch list item, and should be corrected at no cost to you.
Good luck, and let us know how it goes. Resetting the three toilets properly should make a significant difference. It's not rocket science; getting the bowl positioned properly under the pool of water in the bowl is actually pretty-easy to do if one knows what to do and actually cares.