Sounds good except for the chlorinated water straight to the softener. Is this really ok? I am assuming only for a short period of time (maybe one day) because I was under the impression that chlorine isn't very good for the softener media.
You are right, but it is the time plus the chlorine that does the job. You would keep the softener in bypass most of the time, but would give it some time with chlorine, I would think. Here is a quote from page 13 the Fleck 5800 rev B service manual:
Disinfection Of Water Softeners
The materials of construction of the modern water softener
will not support bacterial growth, nor will these materials
contaminate a water supply. During normal use, a softener
may become fouled with organic matter, or in some cases with
bacteria from the water supply. This may result in an off-taste
or odor in the water.
Some softeners may need to be disinfected after installation
and some softeners will require periodic disinfection during
their normal life.
Depending upon the conditions of use, the style of softener, the
type of ion exchanger, and the disinfectant available, a choice
can be made among the following methods.
It then goes on to describe adding an amount of bleach to the brine tank and doing a regen. I don't have a polished procedure for you. I am just pointing that out that the resin is not that fragile for short periods of chlorine.
A little over three years ago the municipal water supply stated that chlorine levels ranged from 1 - 1.45.
Those numbers are not from samples taken at the end of the line. They want to insert enough chlorine so there will be a residual. They usually want 0.5 ppm or more at the house at the end of the pipes. If your water department uses surface water, there may be times of the year when they add more than usual to deal with algae or something.
If your water department uses chlorine rather than chloromine, you could get some sensitive free chlorine test paper to see if the chlorine is making it out of each faucet, dishwasher, and spigot. If they use chloromine, I am not sure about testing. When I do my well and plumbing sanitizing, I bring the pH down to about 5.5 and I use 200 ppm of chlorine in the well. I want to see 50 ppm at each faucet. Those are about twice what is usually recommended. I like overkill. The softener I keep in bypass most of the time, but give it some chlorine during the period when I am removing chlorine and the recirculating chlorine is down to about 10 ppm.
Will letting the city water through for some number of hours be sufficient to sterilize your piping? I don't know.