Sorry for all the pics, I just wanted to make sure that we can all have a good look at what components I am using. The Adapter came with the toilet (Fresca "Antila"), and the T-bolts and flange were purchase at Home Depot and Lowes (both items are standard).
As mentioned in my original post. Unfortunately, the circular shaped slots are concentric with the flange slots rather than running horizontal. And the dimension between them is slightly smaller than the standard 6.125" distance between the slots on the flange. It looks like the problem I am having is more of an interference issue rather than a misalignment. However, I don't have the flange attached to the floor yet, as I wanted to test fit first. That being said, the flange and T-bolts are very rigid when I do the test fit.
Anyway, when I force the adapter over the T-Bolts, they become misaligned. I can keep one bolt straight, but the other bolt wants to go toward the center of the flange and towards the wall. As a result, I am unable to get the adapter to seat flush with the floor (.1875"-.25" gap).